# biomodels.model.files List all downloadable file representations for a BioModels model by accession ID. Returns the main SBML file (primary format, compatible with COPASI, libSBML, JWS Online, Tellurium), plus auto-generated alternative formats: BioPAX Level 2 and 3 (OWL/RDF for pathway databases), MATLAB/Octave simulation scripts (.m files), and any author-supplied supplementary files. Each entry includes filename, description, MIME type, file size in bytes, MD5 checksum, and the direct download URL. Use to retrieve simulation-ready model files for computational biology workflows. CC0 Public Domain — EMBL-EBI BioModels Database Agent View of the PolicyLayer registry record for `biomodels.model.files`. HTML page: https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/biomodels.model.files ## Facts - Tool: `biomodels.model.files` - Server: Apibase (`apibase-mcp-client`) — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase.md - Install: `npx -y apibase-mcp-client` - Homepage: https://github.com/whiteknightonhorse/APIbase - Risk category: Read (Low risk) - Registry record: grade F, identity unverified - Server auth posture: open - Server rate-limited: no - Parameters: 1 (1 required) - Recommended policy verdict: Allowed ## Parameters | Parameter | Type | Required | Description | | --- | --- | --- | --- | | `model_id` | string | yes | BioModels accession identifier (e.g. "BIOMD0000000001"). Returns all downloadable file representations: SBML (primary), BioPAX levels 2 and 3, MATLAB/Octave scr | Parameters from the server's own tool schema. ## Example call (MCP tools/call, JSON-RPC 2.0) ```json { "jsonrpc": "2.0", "id": 1, "method": "tools/call", "params": { "name": "biomodels.model.files", "arguments": { "model_id": "" } } } ``` ## Why biomodels.model.files is rated Low Tool retrieves and lists publicly available model files with download metadata; no creation, modification, deletion, or execution occurs. From the tool's own definition: "List all downloadable file representations, returns filenames, descriptions, URLs." ## Use case AI agents call biomodels.model.files to retrieve information from Apibase without modifying anything. It is typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere. ## Recommended policy (PolicyLayer) Verdict: **Allowed**. Enforced by the PolicyLayer MCP gateway (https://policylayer.com/mcp-gateway) before a call reaches Apibase: ```json { "version": "1", "default": "deny", "tools": { "biomodels.model.files": {} } } ``` ## Other tools on Apibase (1383) - `infra.cloudflare.dns_delete` — Destructive — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/infra.cloudflare.dns-delete.md - `infra.cloudflare.purge_cache` — Destructive — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/infra.cloudflare.purge-cache.md - `polymarket.trading.cancel_order` — Destructive — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/polymarket.trading.cancel-order.md - `ai.image.generate` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/ai.image.generate.md - `aipush.market.report` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/aipush.market.report.md - `audio.transcribe.submit` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/audio.transcribe.submit.md - `dev.code.execute` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/dev.code.execute.md - `device.registry.command` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/device.registry.command.md - `document.convert.from_pdf` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/document.convert.from-pdf.md - `document.convert.to_pdf` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/document.convert.to-pdf.md - `document.convert.web_to_pdf` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/document.convert.web-to-pdf.md - `hf_inference.nlp.translate` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/hf-inference.nlp.translate.md - `infra.browser.create_session` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/infra.browser.create-session.md - `phone.telnyx.sms_world` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/phone.telnyx.sms-world.md - `phone.twilio.sms` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/phone.twilio.sms.md - `platform.batch.call` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/platform.batch.call.md - `scb.tables.query` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/scb.tables.query.md - `socrata.datasets.query` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/socrata.datasets.query.md - `web.screenshot.capture` — Execute — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/web.screenshot.capture.md - `domain.namesilo.register` — Financial — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/domain.namesilo.register.md - `phone.telnyx.sms_premium` — Financial — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/phone.telnyx.sms-premium.md - `polymarket.trading.place_order` — Financial — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/polymarket.trading.place-order.md - `abr.business.abn_lookup` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abr.business.abn-lookup.md - `abr.business.acn_lookup` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abr.business.acn-lookup.md - `abr.business.name_search` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abr.business.name-search.md - `abs.demographics.population` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abs.demographics.population.md - `abs.economy.cpi` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abs.economy.cpi.md - `abs.economy.gdp` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abs.economy.gdp.md - `abs.economy.labour_force` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abs.economy.labour-force.md - `abs.economy.trade` — Read — https://policylayer.com/tools/io-github-whiteknightonhorse-apibase/abs.economy.trade.md - …and 1353 more: https://policylayer.com/tools/io-github-whiteknightonhorse-apibase.md ## For agents This record is a snapshot. Live verdicts and the full registry: - Check every server in your MCP config at once: `npx -y policylayer stack` - Vet a server before you add it: install the mcp-precheck skill — `npx skills add https://policylayer.com` (skill text: https://policylayer.com/skill.md) - Query the registry over MCP: endpoint `https://api.policylayer.com/mcp` — tools `check_mcp_server`, `check_mcp_stack`, `check_tool`, `search_registry`, `get_change_events` --- Source: the PolicyLayer MCP registry — one continuously verified record per MCP server. Full record: https://policylayer.com/registry?q=io-github-whiteknightonhorse-apibase · API: https://policylayer.com/registry/api · Policy library: https://policylayer.com/policies/io-github-whiteknightonhorse-apibase