get_assay_summary_by_sid

A read tool on the Origene MCP server.

SERVEROrigeneMCP SOURCEgentel-lab/origenemcp

Low RISK CLASS

Category Read

Parameters 00 required

Recommended Allowedsee the rule below

Registry record Grade C, identity unverified Pull the record →

This record as markdown: /tools/gentel-lab-origenemcp/get-assay-summary-by-sid.md

WHAT IT DOES

What get_assay_summary_by_sid does on OrigeneMCP

AI agents call get_assay_summary_by_sid to retrieve information from OrigeneMCP without modifying anything. It is typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.

RISK

Why get_assay_summary_by_sid is rated Low

This tool appears to retrieve or query assay summary information indexed by substance/sample ID (SID), consistent with the server's purpose of information retrieval across biomedical databases. No modification, execution, deletion, or financial impact is implied. The 'get' pattern and context within a research database server strongly suggest a read-only operation.

From the tool's definition Tool name 'get_assay_summary_by_sid' indicates retrieval of assay data by SID identifier. The verb 'get' and 'summary' are consistent with data retrieval operations.

Attacks that exploit this kind of access

RECOMMENDED RULE

The rule that runs get_assay_summary_by_sid safely

PolicyLayer is an MCP gateway: it sits between your AI agents and OrigeneMCP, and checks every tool call against a rule you set before the call runs. Nothing changes on the server itself. For get_assay_summary_by_sid, this is the rule to start with:

get_assay_summary_by_sid Allowed

get_assay_summary_by_sid is read-only, so it stays allowed. Everything else on the server is denied unless you say otherwise.

View as policy code

policy.json

{
  "version": "1",
  "default": "deny",
  "tools": {
    "get_assay_summary_by_sid": {}
  }
}

ALLOW ONLY THIS TOOL → Instant setup, no code required.

The button opens the PolicyLayer dashboard: create your workspace, connect OrigeneMCP, apply this rule, and every get_assay_summary_by_sid call is checked against it from then on.

FAQ

Questions about get_assay_summary_by_sid

What does the get_assay_summary_by_sid tool do? +

get_assay_summary_by_sid is a read tool on the Origene MCP server. It is categorised as a Read tool in the OrigeneMCP MCP Server, which means it retrieves data without modifying state.

How do I enforce a policy on get_assay_summary_by_sid? +

Register the Origene MCP server in PolicyLayer and add a rule for get_assay_summary_by_sid: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches OrigeneMCP. Nothing to install.

What risk level is get_assay_summary_by_sid? +

get_assay_summary_by_sid is a Read tool with low risk. Read-only tools are generally safe to allow by default.

Can I rate-limit get_assay_summary_by_sid? +

Yes. Add a rate_limit block to the get_assay_summary_by_sid rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.

How do I block get_assay_summary_by_sid completely? +

Set action: deny in the PolicyLayer policy for get_assay_summary_by_sid. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.

What MCP server provides get_assay_summary_by_sid? +

get_assay_summary_by_sid is provided by the Origene MCP server (gentel-lab/origenemcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.

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