Get dataset reports by biosample id
AI agents call get_genome_dataset_report_by_biosample to retrieve information from OrigeneMCP without modifying anything — typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.
This tool retrieves pre-existing dataset reports indexed by biosample identifier. It queries biomedical databases to return information without side effects—no data creation, modification, deletion, code execution, or financial operations. The sibling tools (clinvar_query_*, depmap_get_*) reinforce the pattern of read-only data retrieval on this server.
From the tool's definition Tool name and description indicate retrieval of reports: 'Get dataset reports by biosample id'. The verb 'Get' and noun 'reports' describe a query/fetch operation with no modification or deletion of data.
Documented attack patterns abuse exactly the kind of access get_genome_dataset_report_by_biosample gives an agent:
PolicyLayer is an MCP gateway — it sits between your AI agents and OrigeneMCP, and nothing reaches the server without passing your rules. This is the rule we recommend for get_genome_dataset_report_by_biosample:
{
"version": "1",
"default": "deny",
"tools": {
"get_genome_dataset_report_by_biosample": {}
}
}get_genome_dataset_report_by_biosample is read-only, so it stays allowed — but everything else on the server is denied unless you say otherwise.
Free to start. No card required.
Get dataset reports by biosample id. It is categorised as a Read tool in the OrigeneMCP MCP Server, which means it retrieves data without modifying state.
Register the Origene MCP server in PolicyLayer and add a rule for get_genome_dataset_report_by_biosample: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches OrigeneMCP. Nothing to install.
get_genome_dataset_report_by_biosample is a Read tool with low risk. Read-only tools are generally safe to allow by default.
Yes. Add a rate_limit block to the get_genome_dataset_report_by_biosample rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.
Set action: deny in the PolicyLayer policy for get_genome_dataset_report_by_biosample. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.
get_genome_dataset_report_by_biosample is provided by the Origene MCP server (gentel-lab/origenemcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.
Start from OrigeneMCP, add the rest of your stack, and see everything your agents can call. Then put policy on all of it.
Free to start. No card required.
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