get_genome_sequence_reports

Get sequence reports by accessions

SERVEROrigeneMCP SOURCEgentel-lab/origenemcp

Low RISK CLASS

Category Read

Parameters 00 required

Recommended Allowedsee the rule below

Registry record Grade C, identity unverified Pull the record →

This record as markdown: /tools/gentel-lab-origenemcp/get-genome-sequence-reports.md

WHAT IT DOES

What get_genome_sequence_reports does on OrigeneMCP

AI agents call get_genome_sequence_reports to retrieve information from OrigeneMCP without modifying anything. It is typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.

RISK

Why get_genome_sequence_reports is rated Low

This tool retrieves pre-computed genomic sequence reports indexed by accession numbers. It performs a lookup/fetch operation on a biomedical database with no side effects, no code execution capability, and no data modification.

From the tool's definition Tool name and description indicate 'Get sequence reports by accessions' — a retrieval operation that queries sequence data without modification, deletion, or execution of arbitrary operations.

Attacks that exploit this kind of access

RECOMMENDED RULE

The rule that runs get_genome_sequence_reports safely

PolicyLayer is an MCP gateway: it sits between your AI agents and OrigeneMCP, and checks every tool call against a rule you set before the call runs. Nothing changes on the server itself. For get_genome_sequence_reports, this is the rule to start with:

get_genome_sequence_reports Allowed

get_genome_sequence_reports is read-only, so it stays allowed. Everything else on the server is denied unless you say otherwise.

View as policy code

policy.json

{
  "version": "1",
  "default": "deny",
  "tools": {
    "get_genome_sequence_reports": {}
  }
}

ALLOW ONLY THIS TOOL → Instant setup, no code required.

The button opens the PolicyLayer dashboard: create your workspace, connect OrigeneMCP, apply this rule, and every get_genome_sequence_reports call is checked against it from then on.

FAQ

Questions about get_genome_sequence_reports

What does the get_genome_sequence_reports tool do? +

Get sequence reports by accessions. It is categorised as a Read tool in the OrigeneMCP MCP Server, which means it retrieves data without modifying state.

How do I enforce a policy on get_genome_sequence_reports? +

Register the Origene MCP server in PolicyLayer and add a rule for get_genome_sequence_reports: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches OrigeneMCP. Nothing to install.

What risk level is get_genome_sequence_reports? +

get_genome_sequence_reports is a Read tool with low risk. Read-only tools are generally safe to allow by default.

Can I rate-limit get_genome_sequence_reports? +

Yes. Add a rate_limit block to the get_genome_sequence_reports rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.

How do I block get_genome_sequence_reports completely? +

Set action: deny in the PolicyLayer policy for get_genome_sequence_reports. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.

What MCP server provides get_genome_sequence_reports? +

get_genome_sequence_reports is provided by the Origene MCP server (gentel-lab/origenemcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.

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