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get_similarity_scores_of_the_protein_set

A read tool on the Origene MCP server.

SERVEROrigeneMCP SOURCEgentel-lab/origenemcp
Low RISK CLASS
Category Read
Parameters 00 required
Recommended Allowedsee the rule below
Registry record Grade C, identity unverified Pull the record →

This record as markdown: /tools/gentel-lab-origenemcp/get-similarity-scores-of-the-protein-set.md

What get_similarity_scores_of_the_protein_set does on OrigeneMCP

AI agents call get_similarity_scores_of_the_protein_set to retrieve information from OrigeneMCP without modifying anything. It is typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.

Why get_similarity_scores_of_the_protein_set is rated Low

The tool appears to retrieve or compute similarity scores for a protein dataset, a typical analytical query operation. Given the biomedical research context (alongside clinvar, depmap, and genome analysis tools), this likely performs comparative analysis on protein data. The empty description reduces confidence slightly, but the name strongly suggests a read operation returning results without side effects.

From the tool's definition Tool name 'get_similarity_scores_of_the_protein_set' indicates retrieval of pre-computed similarity metrics without modification of underlying data. Absence of verbs like 'create', 'update', 'delete', 'execute', or 'run' suggests read-only operation.

Questions about get_similarity_scores_of_the_protein_set

What does the get_similarity_scores_of_the_protein_set tool do? +

get_similarity_scores_of_the_protein_set is a read tool on the Origene MCP server. It is categorised as a Read tool in the OrigeneMCP MCP Server, which means it retrieves data without modifying state.

How do I enforce a policy on get_similarity_scores_of_the_protein_set? +

Register the Origene MCP server in PolicyLayer and add a rule for get_similarity_scores_of_the_protein_set: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches OrigeneMCP. Nothing to install.

What risk level is get_similarity_scores_of_the_protein_set? +

get_similarity_scores_of_the_protein_set is a Read tool with low risk. Read-only tools are generally safe to allow by default.

Can I rate-limit get_similarity_scores_of_the_protein_set? +

Yes. Add a rate_limit block to the get_similarity_scores_of_the_protein_set rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.

How do I block get_similarity_scores_of_the_protein_set completely? +

Set action: deny in the PolicyLayer policy for get_similarity_scores_of_the_protein_set. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.

What MCP server provides get_similarity_scores_of_the_protein_set? +

get_similarity_scores_of_the_protein_set is provided by the Origene MCP server (gentel-lab/origenemcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.

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