map_cds_to_region

Map CDS coordinates to genomic coordinates

Server Ensembl MCP Server munch-group/ensembl-mcp
Category Read
Risk class Low
Parameters 00 required

What map_cds_to_region does on Ensembl MCP Server

AI agents call map_cds_to_region to retrieve information from Ensembl MCP Server without modifying anything — typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.

Why map_cds_to_region needs a policy

The tool retrieves a coordinate mapping between CDS (coding DNA sequence) positions and genomic positions. This is a pure read/query operation against the Ensembl genomics API, consistent with sibling tools that also retrieve or query genomic data. No data is created, modified, or deleted.

From the tool's definition 'Map CDS coordinates to genomic coordinates' — this is a coordinate translation/lookup operation with no side effects

Questions about map_cds_to_region

What does the map_cds_to_region tool do? +

Map CDS coordinates to genomic coordinates. It is categorised as a Read tool in the Ensembl MCP Server MCP Server, which means it retrieves data without modifying state.

How do I enforce a policy on map_cds_to_region? +

Register the Ensembl MCP Server MCP server in PolicyLayer and add a rule for map_cds_to_region: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches Ensembl MCP Server. Nothing to install.

What risk level is map_cds_to_region? +

map_cds_to_region is a Read tool with low risk. Read-only tools are generally safe to allow by default.

Can I rate-limit map_cds_to_region? +

Yes. Add a rate_limit block to the map_cds_to_region rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.

How do I block map_cds_to_region completely? +

Set action: deny in the PolicyLayer policy for map_cds_to_region. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.

What MCP server provides map_cds_to_region? +

map_cds_to_region is provided by the Ensembl MCP Server MCP server (munch-group/ensembl-mcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.

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