find_paralogs

Find paralogous genes within the same species (genes related by duplication). Complements find_orthologs.

Server AGR MCP Server nuin/agr-mcp-server-js
Category Read
Risk class Low
Parameters 00 required

What find_paralogs does on AGR MCP Server

AI agents call find_paralogs to retrieve information from AGR MCP Server without modifying anything — typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.

Why find_paralogs needs a policy

This tool queries and retrieves information about paralogous gene relationships from the Alliance of Genome Resources database. It has no side effects, creates no data modifications, executes no external operations, and poses no destructive or financial risk. It is a straightforward read operation consistent with other similar tools on the server (find_orthologs, get_gene_info, etc.).

From the tool's definition Tool name 'find_paralogs' and description 'Find paralogous genes within the same species (genes related by duplication)' indicate a query operation that retrieves genomic relationship data without modification, deletion, or execution of arbitrary code.

Questions about find_paralogs

What does the find_paralogs tool do? +

Find paralogous genes within the same species (genes related by duplication). Complements find_orthologs. It is categorised as a Read tool in the AGR MCP Server MCP Server, which means it retrieves data without modifying state.

How do I enforce a policy on find_paralogs? +

Register the AGR MCP Server MCP server in PolicyLayer and add a rule for find_paralogs: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches AGR MCP Server. Nothing to install.

What risk level is find_paralogs? +

find_paralogs is a Read tool with low risk. Read-only tools are generally safe to allow by default.

Can I rate-limit find_paralogs? +

Yes. Add a rate_limit block to the find_paralogs rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.

How do I block find_paralogs completely? +

Set action: deny in the PolicyLayer policy for find_paralogs. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.

What MCP server provides find_paralogs? +

find_paralogs is provided by the AGR MCP Server MCP server (nuin/agr-mcp-server-js). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.

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