Search KEGG Orthology entries by function or gene name.
AI agents call search_ko_entries to retrieve information from Oh My KEGG MCP without modifying anything — typically the context-gathering step in research, monitoring, and reporting workflows, before the agent takes action elsewhere.
This tool performs a query operation against the KEGG database to find orthology entries matching specified criteria. No data is created, modified, deleted, or used to trigger external actions. It is a straightforward informational lookup with no blast radius if misused by an AI agent - the worst outcome would be retrieving irrelevant or excessive results, which is harmless.
From the tool's definition Tool description states 'Search KEGG Orthology entries' - a search operation that retrieves data with no modification or side effects. The verb 'search' combined with the read-only nature of querying a biological database indicates data retrieval only.
Documented attack patterns abuse exactly the kind of access search_ko_entries gives an agent:
PolicyLayer is an MCP gateway — it sits between your AI agents and Oh My KEGG MCP, and nothing reaches the server without passing your rules. This is the rule we recommend for search_ko_entries:
{
"version": "1",
"default": "deny",
"tools": {
"search_ko_entries": {}
}
} search_ko_entries is read-only, so it stays allowed — but everything else on the server is denied unless you say otherwise.
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Search KEGG Orthology entries by function or gene name. It is categorised as a Read tool in the Oh My KEGG MCP MCP Server, which means it retrieves data without modifying state.
Register the Oh My KEGG MCP server in PolicyLayer and add a rule for search_ko_entries: allow, deny, rate-limit, or require approval. Point your MCP client at the PolicyLayer proxy URL and the rule is enforced on every call, before it reaches Oh My KEGG MCP. Nothing to install.
search_ko_entries is a Read tool with low risk. Read-only tools are generally safe to allow by default.
Yes. Add a rate_limit block to the search_ko_entries rule in your PolicyLayer policy. For example, setting max: 10 and window: 60 limits the tool to 10 calls per minute. Rate limits are tracked per agent session and reset automatically.
Set action: deny in the PolicyLayer policy for search_ko_entries. The AI agent will receive a policy violation error and cannot call the tool. You can also include a reason field to explain why the tool is blocked.
search_ko_entries is provided by the Oh My KEGG MCP server (martinuslee/oh-my-kegg-mcp). PolicyLayer sits as a proxy in front of this server to enforce policies before tool calls reach the server.
Start from Oh My KEGG MCP, add the rest of your stack, and see everything your agents can call. Then put policy on all of it.
Free to start. No card required.
33 Oh My KEGG MCP tools catalogued and risk-classified — across an index of 43,000+ MCP servers.